Bacterial community dynamics and associated genes in hydrocarbon contaminated soil during bioremediation using brewery spent grain.
Nnadi, Mabel Owupele, Bingle, Lewis and Thomas, Keith (2023) Bacterial community dynamics and associated genes in hydrocarbon contaminated soil during bioremediation using brewery spent grain. Access Microbiology, 5 (6). p. 211. ISSN 2516-8290
Item Type: | Article |
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Abstract
Brewery spent grain (BSG) has previously been exploited in bioremediation. However, detailed knowledge of the associated bacterial community dynamics and changes in relevant metabolites and genes over time, is limited. This study investigated the bioremediation of diesel contaminated soil amended with BSG. We observed the complete degradation of three Total Petroleum Hydrocarbon (TPH C10 – C28) fractions in amended treatments as compared to one fraction in the unamended treatments. The biodegradation rate constant was higher in amended treatments (0.1021 k) than in unamended (0.059 k) and bacterial CFUs increased significantly in amended treatments. The degradation compounds observed fitted into the elucidated diesel degradation pathways and quantitative PCR results showed that the gene copy numbers of all three associated degradation genes, alkB, catA and xylE, were significantly higher in amended treatments. High-throughput sequencing of 16S rRNA gene amplicons showed that amendment with BSG enriched autochthonous hydrocarbon degraders. Also, community shifts of the genera Acinetobacter and Pseudomonas correlated with the abundance of catabolic genes and degradation compounds observed. This study showed that these two genera are present in BSG and thus, may be associated with the enhanced biodegradation observed in amended treatments. The results suggest that the combined evaluation of TPH, microbiological, metabolite and genetic analysis provides a useful wholistic approach to assessing bioremediation.
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More Information
Uncontrolled Keywords: Bacterial community profiling, alkB, catA, xylE catabolic genes, Diesel metabolites 19 Total Petroleum Hydrocarbons 20 Brewery spent grain 21 Bioremediation |
Depositing User: Lewis Bingle |
Identifiers
Item ID: 16141 |
Identification Number: https://doi.org/10.1099/acmi.0.000519.v3 |
ISSN: 2516-8290 |
URI: http://sure.sunderland.ac.uk/id/eprint/16141 | Official URL: https://www.microbiologyresearch.org/content/journ... |
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Catalogue record
Date Deposited: 22 May 2023 11:54 |
Last Modified: 23 Apr 2024 08:45 |
Author: | Mabel Owupele Nnadi |
Author: | Lewis Bingle |
Author: | Keith Thomas |
University Divisions
Faculty of Health Sciences and Wellbeing > School of Nursing and Health SciencesSubjects
Sciences > Biomedical SciencesSciences > Chemistry
Sciences > Environment
Sciences > Health Sciences
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