SURE

Article

Buchanan, Edgar, Alden, Kieran, Pomfret, A, Timmis, Jonathan and Tyrrell, Andy M. (2023) A study of error diversity in robotic swarms for task partitioning in foraging tasks. Frontiers in Robotics and AI, 9. ISSN 2296-9144

Cosgrove, Jason, Alden, Kieran, Stein, Jens, Coles, Mark and Timmis, Jonathan (2021) Simulating CXCR5 Dynamics in Complex Tissue Microenvironments. Frontiers in Immunology. ISSN 1664-3224

Cosgrove, Jason, Novkovic, Mario, Pikor, Natalia, Zhou, Zhaokun, Onder, Lucas, Morbe, Urs, Cupovic, Jovana, Miller, Helen, Alden, Kieran, Thuery, Anne, O-Toole, Peter, Jarrett, Simon, Taylor, Emily, Venetz, Daniel, Heller, Manfred, Uguccioni, Mariagrazia, Legler, Daniel, Lacey, Charles, Coatesworth, Andrew, Polak, Wojciech, Cupedo, Tom, Manoury, Benedicte, Thelen, Marcus, Sten, Jen, Wolf, Marlene, Leake, Mark, Timmis, Jonathan, Ludewig, Berkhard and Coles, Mark (2020) B-cell Zone Reticular Cell Microenvironments Shape CXCL13 Gradient Formation. Nature Communications, 11. p. 3677. ISSN 2041-1723

Read, Mark, Alden, Kieran, Andrews, Paul and Timmis, Jonathan (2020) Strategies for calibrating models of biology. Briefings in Bioinformatics, 21 (1). pp. 24-35. ISSN 1467-5463

Buckley, Paul R., Alden, Kieran, Coccia, Margherita, Chalon, Aurélie, Collignon, Catherine, Temmerman, Stéphane T., Didierlaurent, Arnaud M., van der Most, Robbert, Timmis, Jonathan, Andersen, Claus A. and Coles, Mark C. (2019) Application of Modeling Approaches to Explore Vaccine Adjuvant Mode-of-Action. Frontiers in Immunology, 10. ISSN 1664-3224

Alden, Kieran, Cosgrove, Jason, Coles, Mark and Timmis, Jonathan (2018) Using Emulation to Engineer and Understand Simulations of Biological Systems. IEEE/ACM Transactions on Computational Biology and Bioinformatics. ISSN 1545-5963

Evans, Stephanie, Alden, Kieran, Cucurull-Sanchez, Lourdes, Larminie, Christopher, Coles, Mark C, Kullberg, Marika C and Timmis, Jonathan (2017) ASPASIA: A toolkit for evaluating the effects of biological interventions on SBML model behavior. PLOS Computational Biology, 13 (2). ISSN 1553-734X

Read, Mark N, Alden, Kieran, Rose, Lois M and Timmis, Jonathan (2016) Automated Multi-Objective Calibration of Biological Agent-Based Simulations. Journal of the Royal Society Interface, 13 (122). ISSN 1742-5689

Alden, Kieran, Timmis, Jonathan, Andrews, Paul. S, Veiga-Fernandes, Henrique and Coles, Mark C. (2016) Extending and Applying Spartan to Perform Temporal Sensitivity Analyses for Predicting Changes in Influential Biological Pathways in Computational Models. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 14 (2). pp. 431-442. ISSN 1545-5963

Book

Stepney, Susan, Pollack, Fiona, Alden, Kieran, Andrews, Paul, Bown, James, Droop, Alistair, Greaves, Richard, Read, Mark, Sampson, Adam, Timmis, Jonathan and Winfield, Alan (2019) Engineering Simulations as Scientific Instruments: A Pattern Language. Springer. ISBN 9783030019389