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Validation of cold shock-based technique for purification of recombinant C. elegans Phosphodiesterase 3 protein expressed in E. coli.

Naik, Swapna G, Rhee, Dong Keun, Hockman, Steven, Ahmad Khan, Faiyaz, Samidurai, Arun, Sabouri, Babak, Carter, Noel and Manganiello, Vincent C (2025) Validation of cold shock-based technique for purification of recombinant C. elegans Phosphodiesterase 3 protein expressed in E. coli. Protein expression and purification, 237: S1046-5928. p. 106769. ISSN 1096-0279

Item Type: Article

Abstract

Phosphodiesterase 3 enzymes (PDE3) play important roles in the regulation of adipocyte lipolysis and cardiac contractility by hydrolyzing cAMP and cGMP. This study reports the cloning, expression, and purification of recombinant Caenorhabditis elegans phosphodiesterase 3 (CEPDE3) isoforms, using a cold shock-based technique. The two closely related isoforms of the CEPDE3 gene (isoform F and isoform A) were cloned into the pGEX-6P-1 vector and expressed in E. coli as fusion proteins with a glutathione-S transferase (GST) tag at their amino terminus and purified by affinity chromatography using a glutathione Sepharose column. To optimize expression and recovery of soluble CEPDE3 protein from E. coli, we applied a “cold shock” technique at 4 °C following IPTG induction. Our findings suggest improved protein expression using an N-terminal GST tag instead of a C-terminal 6-histidine (6His) tag. Exposure of GST-tagged CEPDE3 to cold shock improved the protein solubility of CEPDE3 isoforms recovered by affinity chromatography. Studying CEPDE3 expression in C. elegans may enable us to understand the structure-function relationship and help crystallize the proteins to identify its catalytic pocket, contributing to the design of more effective small modulators of PDE3 catalytic activity.

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More Information

Uncontrolled Keywords: cold shock, soluble proteins, E. coli, protein expression, CEPDE3, GST-tag, lower temperature induction, protein insolubility, CEPDE3 enzyme, C. elegans Phosphodiesterase 3
SWORD Depositor: Publication Router
Depositing User: Publication Router

Identifiers

Item ID: 19545
Identification Number: 10.1016/j.pep.2025.106769
ISSN: 1096-0279
URI: https://sure.sunderland.ac.uk/id/eprint/19545
Official URL: https://www.sciencedirect.com/science/article/pii/...

Users with ORCIDS

ORCID for Noel Carter: ORCID iD orcid.org/0000-0002-6888-3829

Catalogue record

Date Deposited: 10 Nov 2025 13:46
Last Modified: 10 Nov 2025 13:46

Contributors

Author: Noel Carter ORCID iD
Author: Swapna G Naik
Author: Dong Keun Rhee
Author: Steven Hockman
Author: Faiyaz Ahmad Khan
Author: Arun Samidurai
Author: Babak Sabouri
Author: Vincent C Manganiello

University Divisions

Faculty of Health Sciences and Wellbeing > Pharmacy and Pharmaceutical Sciences

Subjects

Sciences > Health Sciences

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